Scalable incremental clustering for tandem mass spectra in untargeted metabolomics

Source
Journal of proteome research - ISSN 1535-3893- (2026) p.
Author(s)
    Xianghu Wang, Deepa D. Archarya, Christopher J. Brown, Ken Clevenger, Jie Hu, Ashley Kretsch, Carla Menegatti, Quanbo Xiong, Wout Bittremieux, Mingxun Wang

Improved open modification searching via unified spectral search with predicted libraries and enhanced vector representations in ANN-SoLo

Source
Journal of proteome research - ISSN 1535-3893- (2026) p.
Author(s)

Improvements to Casanovo, a deep learning de novo peptide sequencer

Source
Journal of proteome research - ISSN 1535-3893- (2025) p.
Author(s)
    Gwenneth Straub, Varun Ananth, William E. Fondrie, Chris Hsu, Daniela Klaproth-Andrade, Marina Pominova, Michael Riffle, Justin Sanders, Bo Wen, Lingwen Xu, Melih Yilmaz, Michael J. Maccoss, Sewoong Oh, Wout Bittremieux, William Stafford Noble